Basic Information
Locus ID:
COCNU_06G004340
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 11553127 | 11556941 | + | COCNU_06G004340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 101,899.15 Da | 38.79 | 101.64 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 592 | 876 | 5.93157E-98 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 8.6E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 75 | 131 | 2.6E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 588 | 872 | 2.9E-45 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 333 | 1.02E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 258 | 521 | 7.48E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 581 | 874 | 1.75E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 363 | 528 | 2.0E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 667 | 884 | 6.8E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 208 | 6.2E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 209 | 362 | 2.9E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 568 | 666 | 6.3E-21 | - |
| SMART | SM00369 | LRR_typ_2 | 503 | 528 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 119 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 48.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 586 | 875 | 3.3E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 586 | 880 | 36.795761 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 726 | 738 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 592 | 617 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 899 | 918 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_038981309.1 | receptor-like protein kinase HSL1 [Phoenix dactylifera] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IAT7 | Receptor-like protein kinase HSL1 OS=Cocos nucifera OX=13894 GN=COCNU_06G004340 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology