Basic Information
Locus ID:
COCNU_06G004330
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 11525315 | 11529056 | + | COCNU_06G004330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 114,303.82 Da | 41.30 | 102.73 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 697 | 998 | 3.20064E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 145 | 204 | 3.8E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 693 | 994 | 1.2E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 77 | 131 | 1.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 489 | 539 | 4.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 2.3E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 684 | 996 | 7.28E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 380 | 6.38E-55 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 292 | 617 | 2.9E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 363 | 625 | 9.2E-58 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 1006 | 2.4E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 362 | 5.1E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 673 | 771 | 3.3E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 207 | 1.0E-45 | IPR032675 |
| SMART | SM00220 | serkin_6 | 691 | 1011 | 6.9E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 95 | 119 | 5.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 550 | 573 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 526 | 549 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 502 | 525 | 54.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 528 | 550 | 7.234511 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 1002 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 722 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 831 | 843 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1022 | 1046 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_038981309.1 | receptor-like protein kinase HSL1 [Phoenix dactylifera] | 0 |
| F4I2N7 | Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IAF3 | Receptor-like protein kinase HSL1 OS=Cocos nucifera OX=13894 GN=COCNU_06G004330 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology