Basic Information
Locus ID:
COCNU_06G003580
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 9705385 | 9783882 | + | COCNU_06G003580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 173,951.91 Da | 39.07 | 90.91 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1227 | 1494 | 9.69212E-95 | - |
| CDD | cd14066 | STKc_IRAK | 548 | 814 | 1.57084E-92 | - |
| Pfam | PF11721 | Malectin domain | 1060 | 1198 | 2.2E-27 | IPR021720 |
| Pfam | PF00560 | Leucine Rich Repeat | 990 | 1011 | 1.6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 1223 | 1489 | 4.4E-49 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 299 | 470 | 2.1E-39 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 545 | 809 | 4.9E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 270 | 291 | 0.81 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 526 | 822 | 7.82E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 181 | 295 | 1.59E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1206 | 1505 | 4.99E-82 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 876 | 1034 | 2.62E-29 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 1057 | 1221 | 2.2E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1227 | 1297 | 4.7E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 824 | 952 | 1.7E-15 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 299 | 475 | 4.8E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 234 | 298 | 3.9E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 953 | 1056 | 1.9E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 170 | 233 | 2.2E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1298 | 1510 | 2.3E-59 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 618 | 823 | 1.3E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 507 | 617 | 1.2E-35 | - |
| SMART | SM00220 | serkin_6 | 1221 | 1492 | 7.9E-37 | IPR000719 |
| SMART | SM00220 | serkin_6 | 542 | 812 | 8.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1221 | 1496 | 41.516518 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 542 | 823 | 40.21619 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1343 | 1355 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 664 | 676 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53440.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_029120078.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X2 [Elaeis guineensis] | 0 |
| C0LGG9 | Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0IAA7 | Putative LRR receptor-like serine/threonine-protein kinase OS=Cocos nucifera OX=13894 GN=COCNU_06G003580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology