Basic Information
Locus ID:
COCNU_06G003110
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 8730226 | 8740552 | + | COCNU_06G003110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 63,433.27 Da | 57.62 | 76.18 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 152 | 226 | 9.91607E-15 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 264 | 358 | 6.3E-11 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 144 | 240 | 7.6E-15 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 153 | 240 | 1.31E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 441 | 554 | 3.6E-7 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 71 | 135 | 1.7E-5 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 276 | 381 | 5.3E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 136 | 275 | 1.0E-18 | IPR011333 |
| SMART | SM00875 | BACK_2 | 258 | 360 | 2.3E-9 | IPR011705 |
| SMART | SM00225 | BTB_4 | 122 | 243 | 2.7E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 143 | 212 | 13.942714 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 77 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_010914379.1 | BTB/POZ domain-containing protein POB1 [Elaeis guineensis] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0IAT6 | BTB/POZ domain-containing protein POB1 OS=Cocos nucifera OX=13894 GN=COCNU_06G003110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology