Basic Information
Locus ID:
COCNU_06G000680
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
IAA15
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 1902535 | 1906357 | - | COCNU_06G000680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 21,686.05 Da | 48.11 | 65.58 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 99 | 179 | 2.2E-34 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 91 | 179 | 4.81E-17 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 95 | 189 | 2.0E-31 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 101 | 199 | 17.042486 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_038974668.1 | auxin-responsive protein IAA1-like [Phoenix dactylifera] | 0 |
| Q5VRD1 | Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0N297 | Auxin-responsive protein OS=Cocos nucifera OX=13894 GN=COCNU_06G000680 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology