Basic Information
Locus ID:
COCNU_06G000330
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 811015 | 823834 | - | COCNU_06G000330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 112,109.20 Da | 47.79 | 77.41 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 22 | 120 | 1.75629E-32 | - |
| CDD | cd13999 | STKc_MAP3K-like | 759 | 1004 | 2.13429E-101 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 754 | 1004 | 2.0E-56 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 37 | 120 | 2.4E-9 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 36 | 121 | 3.14E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 737 | 1002 | 5.19E-72 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 38 | 122 | 2.4E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 840 | 1014 | 4.5E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 740 | 839 | 1.2E-22 | - |
| SMART | SM00666 | PB1_new | 32 | 121 | 7.8E-13 | IPR000270 |
| SMART | SM00220 | serkin_6 | 753 | 1007 | 4.0E-45 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 753 | 1007 | 35.24102 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 878 | 890 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 759 | 780 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 975 | 997 | 3.0E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 835 | 848 | 3.0E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 872 | 890 | 3.0E-11 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57610.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_010920603.1 | uncharacterized protein LOC105044392 isoform X1 [Elaeis guineensis] | 0 |
| A0A2R6XIK6 | RAF-like serine/threonine-protein kinase PRAF OS=Marchantia polymorpha OX=3197 GN=PRAF PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I9J4 | Protein kinase domain-containing protein OS=Cocos nucifera OX=13894 GN=COCNU_06G000330 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology