Basic Information
Locus ID:
COCNU_05G009400
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 53455712 | 53459342 | + | COCNU_05G009400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 91,692.23 Da | 37.86 | 86.62 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 509 | 782 | 3.89453E-98 | - |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 363 | 406 | 4.1E-8 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 504 | 777 | 1.1E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 10 | 30 | 0.011 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 299 | 336 | 3.0E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 21 | 412 | 1.16E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 480 | 788 | 1.09E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 297 | 424 | 8.2E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 580 | 1.4E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 581 | 798 | 1.1E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 295 | 8.7E-70 | IPR032675 |
| SMART | SM00220 | serkin_6 | 503 | 783 | 8.3E-45 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 503 | 782 | 40.498871 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 628 | 640 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 509 | 531 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 856 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 845 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010936890.1 | receptor protein kinase TMK1 [Elaeis guineensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IA38 | Receptor protein kinase TMK1 OS=Cocos nucifera OX=13894 GN=COCNU_05G009400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology