Basic Information
Locus ID:
COCNU_05G007980
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 49711143 | 49726356 | - | COCNU_05G007980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 205,080.16 Da | 45.72 | 75.42 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15725 | FYVE_PIKfyve_Fab1 | 32 | 99 | 6.4239E-30 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1541 | 1804 | 1.25104E-149 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 380 | 652 | 2.32278E-134 | - |
| Pfam | PF01363 | FYVE zinc finger | 33 | 101 | 5.4E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1580 | 1746 | 5.1E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 403 | 645 | 8.9E-33 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 446 | 618 | 2.88E-43 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1539 | 1804 | 2.68E-80 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 105 | 2.4E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 112 | 1.1E-21 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 445 | 618 | 5.5E-55 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1665 | 1805 | 1.5E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1523 | 1661 | 5.1E-36 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1518 | 1805 | 2.1E-126 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 2.3E-18 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 13.017267 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1485 | 1804 | 56.735569 | IPR002498 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010937259.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B isoform X1 [Elaeis guineensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N1V5 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Cocos nucifera OX=13894 GN=COCNU_05G007980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology