Basic Information
Locus ID:
COCNU_05G007870
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 49466543 | 49478289 | - | COCNU_05G007870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 82,504.62 Da | 41.91 | 85.35 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 423 | 730 | 1.3048E-84 | - |
| Pfam | PF00069 | Protein kinase domain | 418 | 725 | 1.2E-36 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 100 | 115 | 0.47 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 75 | 2.1E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 151 | 209 | 8.3E-12 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 247 | 5.24E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 727 | 4.78E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 261 | 7.3E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 381 | 494 | 8.0E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 496 | 751 | 2.0E-54 | - |
| SMART | SM00369 | LRR_typ_2 | 100 | 126 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 148 | 171 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 195 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 218 | 77.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 198 | 220 | 7.627247 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 730 | 36.131462 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 423 | 446 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 172 | 185 | 5.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 151 | 164 | 5.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 761 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 761 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_010937237.1 | protein STRUBBELIG-RECEPTOR FAMILY 7 [Elaeis guineensis] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I917 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Cocos nucifera OX=13894 GN=COCNU_05G007870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology