Basic Information
Locus ID:
COCNU_05G006660
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 44424779 | 44425945 | + | COCNU_05G006660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.39 | 15,173.19 Da | 28.65 | 104.77 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 98 | 8.48E-9 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 103 | 4.7E-21 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34210.1 | somatic embryogenesis receptor-like kinase 2. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. | 0 |
| RefSeq | XP_010937037.1 | LRR receptor kinase BAK1 [Elaeis guineensis] | 0 |
| B8BB68 | LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0I8G8 | Putative LRR receptor kinase BAK1 OS=Cocos nucifera OX=13894 GN=COCNU_05G006660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30110870 |
| Arecaceae | Cocos nucifera | 1 | COCNU_05G006660 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020346 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G31964 |
| Poaceae | Echinochloa crus-galli | 1 | BH05.1369 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-17468, nbisL1-mrna-8036 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5751 |
| Salicaceae | Populus euphratica | 1 | populus_peu16677 |