Basic Information
Locus ID:
COCNU_05G003680
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 14762691 | 14786826 | + | COCNU_05G003680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 87,540.71 Da | 43.07 | 81.77 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 111 | 306 | 1.63371E-99 | - |
| Pfam | PF00183 | Hsp90 protein | 343 | 743 | 1.6E-154 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 124 | 284 | 2.2E-11 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 289 | 339 | 1.6E-8 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 616 | 730 | 3.14E-26 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 102 | 316 | 3.14E-60 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 344 | 593 | 9.86E-83 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 593 | 734 | 2.1E-40 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 343 | 505 | 6.7E-67 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 90 | 329 | 4.3E-87 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 506 | 592 | 6.5E-34 | - |
| SMART | SM00387 | HKATPase_4 | 124 | 286 | 0.0039 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 76 | 769 | 2.4E-221 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 122 | 131 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 172 | 189 | 3.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 190 | 207 | 3.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 292 | 310 | 3.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 123 | 145 | 3.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 219 | 241 | 3.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 274 | 291 | 3.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 102 | 122 | 3.4E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 92 | 731 | 24.918007 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 774 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_010905224.1 | heat shock protein 90-6, mitochondrial [Elaeis guineensis] | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I8K8 | Heat shock protein 90-6, mitochondrial OS=Cocos nucifera OX=13894 GN=COCNU_05G003680 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology