Basic Information
Locus ID:
COCNU_05G003010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 9553734 | 9558025 | - | COCNU_05G003010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 66,093.14 Da | 36.83 | 91.18 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 2 | 105 | 1.25555E-44 | - |
| Pfam | PF00651 | BTB/POZ domain | 9 | 99 | 2.3E-6 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 192 | 447 | 2.9E-92 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 3 | 98 | 3.61E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 102 | 1.8E-11 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 10 | 78 | 9.930406 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 192 | 471 | 91.803749 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 497 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_008787168.2 | BTB/POZ domain-containing protein NPY2 isoform X2 [Phoenix dactylifera] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0N135 | BTB/POZ domain-containing protein NPY4 OS=Cocos nucifera OX=13894 GN=COCNU_05G003010 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology