Basic Information
Locus ID:
COCNU_05G000930
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2485462 | 2488689 | - | COCNU_05G000930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 102,938.02 Da | 34.83 | 98.69 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 634 | 908 | 3.67813E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 630 | 906 | 1.3E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 89 | 144 | 5.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 469 | 526 | 2.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 183 | 242 | 6.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 19 | 332 | 3.45E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 253 | 556 | 8.33E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 621 | 908 | 1.2E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 620 | 705 | 2.2E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 161 | 2.1E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 706 | 925 | 7.2E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 234 | 563 | 1.4E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 162 | 228 | 2.9E-18 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 372 | 396 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 490 | 514 | 39.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 628 | 912 | 2.6E-38 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 181 | 205 | 6.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 444 | 468 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 229 | 253 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 135 | 290.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 628 | 912 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 751 | 763 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 634 | 656 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 114 | 127 | 9.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 181 | 194 | 9.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_008785692.3 | LRR receptor-like serine/threonine-protein kinase HSL2 [Phoenix dactylifera] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N156 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Cocos nucifera OX=13894 GN=COCNU_05G000930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology