Basic Information
Locus ID:
COCNU_05G000290
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Serine-threonine protein kinase, plant-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 914434 | 916107 | - | COCNU_05G000290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 60,975.64 Da | 40.64 | 96.09 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 291 | 541 | 1.1E-34 | IPR000719 |
| Pfam | PF01476 | LysM domain | 129 | 174 | 7.2E-4 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 266 | 544 | 2.39E-60 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 127 | 188 | 3.7E-5 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 347 | 556 | 1.2E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 257 | 346 | 9.3E-14 | - |
| ProSiteProfiles | PS51782 | LysM domain profile. | 127 | 173 | 10.330514 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 283 | 545 | 28.824186 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_010936173.1 | lysM domain receptor-like kinase 4 [Elaeis guineensis] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N118 | LysM domain receptor-like kinase 4 OS=Cocos nucifera OX=13894 GN=COCNU_05G000290 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology