Basic Information
Locus ID:
COCNU_04G015300
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 64817934 | 64839744 | - | COCNU_04G015300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 139,780.98 Da | 48.93 | 81.05 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 976 | 1229 | 9.7E-39 | IPR000719 |
| Pfam | PF00481 | Protein phosphatase 2C | 417 | 570 | 1.9E-7 | IPR001932 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 958 | 1229 | 4.32E-65 | IPR011009 |
| SUPERFAMILY | SSF81606 | PP2C-like | 307 | 577 | 1.44E-22 | IPR036457 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 954 | 1046 | 9.8E-25 | - |
| Gene3D | G3DSA:3.60.40.10 | - | 277 | 626 | 6.1E-44 | IPR036457 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1047 | 1243 | 9.0E-45 | - |
| SMART | SM00220 | serkin_6 | 974 | 1241 | 3.5E-26 | IPR000719 |
| SMART | SM00332 | PP2C_4 | 293 | 633 | 2.7E-7 | IPR001932 |
| ProSiteProfiles | PS51746 | PPM-type phosphatase domain profile. | 291 | 746 | 22.797543 | IPR001932 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 974 | 1241 | 34.322311 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 980 | 1002 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1092 | 1104 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 306 | - | - |
| Coils | Coil | Coil | 848 | 882 | - | - |
| Coils | Coil | Coil | 820 | 840 | - | - |
| Coils | Coil | Coil | 440 | 460 | - | - |
| Coils | Coil | Coil | 911 | 934 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07630.1 | pol-like 5. Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves. | 0 |
| RefSeq | XP_010920597.1 | U-box domain-containing protein 33 [Elaeis guineensis] | 0 |
| Q9LQN6 | Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana OX=3702 GN=PLL5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0I871 | protein-serine/threonine phosphatase OS=Cocos nucifera OX=13894 GN=COCNU_04G015300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg8343 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_5897 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah028043 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g173960 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg1771, Sbi_jg34761 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2966 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003189 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73014, Sgl76555 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000005998, gene:ENSEOMG00000037084 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0002760, CQ.Regalona.r1.9BG0002910 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30060120 |
| Arecaceae | Cocos nucifera | 1 | COCNU_04G015300 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103703486 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G07742 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2185 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2344 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g19320 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g00360, gene.Thate07g13830 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.1282 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00002356 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G06851 |
| Poaceae | Echinochloa crus-galli | 1 | CH09.1232 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0636500, gene-QOZ80_8BG0665160 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0107400.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_038480 |
| Poaceae | Oryza coarctata | 2 | Oco19G000020, Oco20G000020 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g01060.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G243300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0305210, Pt_Chr0305250 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr20G000540, Chr29G002590, Chr29G002600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG008760, gene_TRIDC2BG010580 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G079300.1, TraesCS2B02G094100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb082370_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-42544 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g23218 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.1862, evm.TU.LG14.17 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g01350 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.819 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-30196 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-19659 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16208 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000015l.489 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015439 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4407 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20956 |
| Salicaceae | Populus euphratica | 3 | populus_peu02133, populus_peu02253, populus_peu35663 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132643562 |
| Solanaceae | Solanum chilense | 1 | SOLCI004543800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107003136 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_2626 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G0082 |
| Zosteraceae | Zostera marina | 1 | Zosma01g38570.v3.1 |