Basic Information
Locus ID:
COCNU_04G014310
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 62675980 | 62678187 | - | COCNU_04G014310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 78,175.25 Da | 46.77 | 86.83 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 264 | 6.76901E-77 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 396 | 673 | 1.78076E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 391 | 605 | 4.4E-48 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 33 | 272 | 1.2E-52 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 31 | 271 | 8.86E-57 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 372 | 707 | 1.01E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 473 | 692 | 8.5E-58 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 30 | 277 | 1.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 363 | 472 | 4.3E-29 | - |
| SMART | SM00220 | serkin_6 | 390 | 681 | 1.0E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 390 | 682 | 38.746254 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 517 | 529 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 396 | 419 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 147 | 153 | - | IPR019825 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010920903.1 | L-type lectin-domain containing receptor kinase VIII.1 [Elaeis guineensis] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0N0K5 | L-type lectin-domain containing receptor kinase VIII.1 OS=Cocos nucifera OX=13894 GN=COCNU_04G014310 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology