Basic Information
Locus ID:
COCNU_04G007590
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 27581448 | 27593052 | + | COCNU_04G007590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.66 | 9,549.00 Da | 33.22 | 58.09 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00585.1 | 0 | |
| RefSeq | XP_010921950.1 | uncharacterized protein LOC105045386 [Elaeis guineensis] | 0 |
| TrEMBL | A0A8K0I5N7 | Transmembrane protein OS=Cocos nucifera OX=13894 GN=COCNU_04G007590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg10175, jg33989 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah023067 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g005800 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg4444, Sbi_jg49352 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000385 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl11149, Sgl16552 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0005120, CQ.Regalona.r1.2BG0024380 |
| Apiaceae | Apium graveolens | 1 | Ag2G01994 |
| Arecaceae | Cocos nucifera | 1 | COCNU_04G007590 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709911 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G27796 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G00585.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10026679m.g.v1.0, Thhalv10029049m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g00620.v2.2, Sp7g35520.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB02g088870.2N, BniB08g041710.2N, BniB08g042790.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0154 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0163 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g04250 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1518s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g12130 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00040949 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G03490, Lb2G11012 |
| Poaceae | Echinochloa crus-galli | 2 | BH03.3092, CH03.3286 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0526100, gene-QOZ80_6BG0479960 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0505770.1 |
| Poaceae | Oryza coarctata | 2 | Oco17G011810, Oco18G011710 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g38740.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G271900 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0700177, Pt_Chr0700364 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr10G006310, Chr11G013250, Chr14G008890, Chr21G009070 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G580400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG053190, gene_TRIDC5BG057270 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G364100.1, TraesCS5B02G366000.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb104680_P001, Zm00001eb320330_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-31896, nbis-gene-50723 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g29889, Zma_g32077 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g07740 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.300 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1852 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-10503 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000006l.556 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00013653 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-9216 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7006 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631884 |
| Solanaceae | Solanum chilense | 1 | SOLCI000293400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012259 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_1450, gene_15245 |
| Zosteraceae | Zostera marina | 1 | Zosma01g22150.v3.1 |