Basic Information
Locus ID:
COCNU_04G007220
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 24368329 | 24372260 | - | COCNU_04G007220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 43,156.14 Da | 66.95 | 59.36 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 279 | 356 | 1.5E-7 | IPR001025 |
| Gene3D | G3DSA:2.30.30.490 | - | 213 | 369 | 5.3E-42 | IPR043151 |
| SMART | SM00439 | BAH_4 | 276 | 384 | 3.5E-12 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 276 | 389 | 14.805275 | IPR001025 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 136 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_010908353.1 | DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Elaeis guineensis] | 0 |
| Q5KQL9 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0I5V7 | Putative DNA (Cytosine-5)-methyltransferase CMT2 OS=Cocos nucifera OX=13894 GN=COCNU_04G007220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology