Basic Information
Locus ID:
COCNU_04G004810
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 12999186 | 13059920 | + | COCNU_04G004810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 81,766.93 Da | 32.71 | 99.46 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 513 | 734 | 3.50857E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 508 | 718 | 3.2E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 41 | 101 | 3.2E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 273 | 3.74E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 481 | 717 | 2.46E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 129 | 183 | 1.7E-10 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 583 | 738 | 6.9E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 477 | 582 | 4.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 128 | 1.1E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 287 | 2.3E-11 | IPR032675 |
| SMART | SM00220 | serkin_6 | 507 | 732 | 4.8E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 64 | 88 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 112 | 136 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 231 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 16 | 40 | 76.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 507 | 742 | 36.414143 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 628 | 640 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 513 | 535 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010922796.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Elaeis guineensis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0I5A5 | Putative LRR receptor-like serine/threonine-protein kinase OS=Cocos nucifera OX=13894 GN=COCNU_04G004810 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology