Basic Information
Locus ID:
COCNU_04G004760
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
inactive receptor kinase At5g58300
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 12807430 | 12820390 | - | COCNU_04G004760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 133,658.89 Da | 45.98 | 96.67 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 936 | 1201 | 4.93557E-90 | - |
| CDD | cd14066 | STKc_IRAK | 337 | 602 | 4.93557E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 621 | 653 | 3.9E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 707 | 765 | 4.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 54 | 3.9E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 933 | 1196 | 6.5E-36 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 335 | 599 | 6.6E-36 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 108 | 166 | 4.0E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 177 | 199 | 0.069 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 776 | 798 | 0.069 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 934 | 1200 | 4.37E-60 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 218 | 7.94E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 600 | 4.99E-60 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 629 | 817 | 7.94E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 130 | 1.1E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 298 | 406 | 1.2E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 730 | 818 | 8.4E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 619 | 729 | 1.1E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 131 | 219 | 8.4E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 897 | 1005 | 1.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 407 | 611 | 2.0E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1006 | 1223 | 2.1E-49 | - |
| SMART | SM00369 | LRR_typ_2 | 107 | 130 | 5.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 682 | 705 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 83 | 106 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 175 | 198 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 774 | 797 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 706 | 729 | 5.4 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 930 | 1224 | 32.951313 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 331 | 608 | 33.092655 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 337 | 368 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 936 | 967 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 882 | 904 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1202 | 1224 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58300.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_008803002.2 | probable inactive receptor kinase At5g58300 [Phoenix dactylifera] | 0 |
| Q9LVM0 | Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana OX=3702 GN=At5g58300 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I577 | Putative inactive receptor kinase OS=Cocos nucifera OX=13894 GN=COCNU_04G004760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology