Basic Information
Locus ID:
COCNU_04G003510
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 9511847 | 9520779 | - | COCNU_04G003510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 58,209.41 Da | 46.60 | 104.05 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 6 | 30 | 7.9E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 252 | 398 | 5.4E-16 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 5 | 155 | 2.25E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 221 | 491 | 9.53E-40 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 172 | 6.6E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 321 | 501 | 3.9E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 214 | 320 | 1.2E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 238 | 493 | 17.74313 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40270.2 | Protein kinase family protein. | 0 |
| RefSeq | XP_010922598.1 | inactive receptor-like serine/threonine-protein kinase At2g40270 [Elaeis guineensis] | 0 |
| Q9SIZ4 | Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana OX=3702 GN=At2g40270 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0MZG7 | Inactive receptor-like serine/threonine-protein kinase OS=Cocos nucifera OX=13894 GN=COCNU_04G003510 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology