Basic Information
Locus ID:
COCNU_04G003230
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 8832620 | 8851916 | - | COCNU_04G003230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 61,642.46 Da | 42.54 | 84.07 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 73 | 331 | 2.57753E-135 | - |
| Pfam | PF13499 | EF-hand domain pair | 378 | 438 | 4.0E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 450 | 515 | 7.2E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 76 | 332 | 4.8E-74 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 339 | 9.31E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 360 | 541 | 9.1E-46 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 341 | 518 | 4.1E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 75 | 159 | 1.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 160 | 340 | 7.2E-61 | - |
| SMART | SM00054 | efh_1 | 489 | 517 | 3.8E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 415 | 443 | 0.13 | IPR002048 |
| SMART | SM00054 | efh_1 | 451 | 479 | 4.1E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 379 | 407 | 8.6E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 74 | 332 | 8.5E-97 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 375 | 410 | 16.493979 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 411 | 446 | 8.878534 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 447 | 482 | 14.792358 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 332 | 47.325592 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 485 | 520 | 14.011288 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 388 | 400 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 80 | 103 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 498 | 510 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 194 | 206 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 460 | 472 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 49 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010922561.1 | LOW QUALITY PROTEIN: calcium-dependent protein kinase 3-like [Elaeis guineensis] | 0 |
| Q8LPZ7 | Calcium-dependent protein kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0MZW7 | Calcium-dependent protein kinase 3 OS=Cocos nucifera OX=13894 GN=COCNU_04G003230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology