Basic Information
Locus ID:
COCNU_04G002910
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6990145 | 7036466 | - | COCNU_04G002910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 310,929.84 Da | 47.53 | 69.07 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 992 | 1076 | 9.5385E-27 | - |
| Pfam | PF00855 | PWWP domain | 995 | 1075 | 5.4E-17 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 989 | 1092 | 3.37E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 984 | 1086 | 9.2E-24 | - |
| SMART | SM00293 | PWWP_4 | 992 | 1053 | 3.0E-9 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 994 | 1055 | 14.555655 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2106 | 2128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2368 | 2404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1438 | 1453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2847 | 2882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2847 | 2870 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1424 | 1453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1653 | 1667 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2368 | 2391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1472 | 1499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1625 | 1701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1843 | 1865 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_038988364.1 | uncharacterized protein LOC103718133 isoform X1 [Phoenix dactylifera] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0MZE5 | PWWP domain-containing protein OS=Cocos nucifera OX=13894 GN=COCNU_04G002910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology