Basic Information
Locus ID:
COCNU_03G016860
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 81739042 | 81751397 | - | COCNU_03G016860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 45,744.87 Da | 48.56 | 87.02 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03105 | SPX domain | 4 | 51 | 3.1E-10 | IPR004331 |
| Pfam | PF00141 | Peroxidase | 237 | 359 | 1.7E-34 | IPR002016 |
| SUPERFAMILY | SSF48113 | Heme-dependent peroxidases | 219 | 419 | 3.54E-49 | IPR010255 |
| Gene3D | G3DSA:1.10.520.10 | - | 220 | 365 | 5.2E-53 | - |
| Gene3D | G3DSA:1.10.420.10 | Peroxidase, domain 2 | 386 | 398 | 1.8E-7 | - |
| Gene3D | G3DSA:1.10.520.10 | - | 399 | 419 | 1.8E-7 | - |
| ProSiteProfiles | PS51382 | SPX domain profile. | 1 | 49 | 13.058819 | IPR004331 |
| ProSiteProfiles | PS50873 | Plant heme peroxidase family profile. | 219 | 419 | 37.500973 | IPR002016 |
| ProSitePatterns | PS00436 | Peroxidases active site signature. | 251 | 262 | - | IPR019794 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 309 | 326 | 3.1E-12 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 327 | 339 | 3.1E-12 | IPR002016 |
| PRINTS | PR00461 | Plant peroxidase signature | 229 | 248 | 8.6E-23 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 289 | 302 | 8.6E-23 | IPR000823 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 251 | 265 | 3.1E-12 | IPR002016 |
| PRINTS | PR00461 | Plant peroxidase signature | 308 | 318 | 8.6E-23 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 253 | 273 | 8.6E-23 | IPR000823 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 108 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41480.1 | Peroxidase superfamily protein. | 0 |
| RefSeq | XP_029118907.1 | LOW QUALITY PROTEIN: peroxidase 25-like [Elaeis guineensis] | 0 |
| B8B4D0 | SPX domain-containing protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=SPX1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8K0I489 | Peroxidase OS=Cocos nucifera OX=13894 GN=COCNU_03G016860 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology