Basic Information
Locus ID:
COCNU_03G016200
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 79895307 | 79896976 | + | COCNU_03G016200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 38,932.29 Da | 52.19 | 79.97 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 113 | 154 | 2.4E-9 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 170 | 204 | 3.0E-5 | IPR006652 |
| Pfam | PF00646 | F-box domain | 5 | 47 | 1.0E-4 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 81 | 323 | 1.83E-41 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 46 | 9.81E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 62 | 285 | 1.4E-38 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 55 | 3.4E-5 | - |
| SMART | SM00612 | kelc_smart | 171 | 218 | 2.7E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 119 | 167 | 1.7E-7 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_010915027.1 | F-box/kelch-repeat protein At1g80440 [Elaeis guineensis] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0MZZ4 | F-box/kelch-repeat protein OS=Cocos nucifera OX=13894 GN=COCNU_03G016200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology