Basic Information
Locus ID:
COCNU_03G016190
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 79861662 | 79863150 | + | COCNU_03G016190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 39,299.38 Da | 53.04 | 76.14 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 172 | 207 | 3.2E-7 | IPR006652 |
| Pfam | PF13415 | Galactose oxidase, central domain | 119 | 166 | 2.3E-8 | - |
| SUPERFAMILY | SSF117281 | Kelch motif | 81 | 328 | 7.59E-39 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 47 | 2.75E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 66 | 354 | 5.7E-36 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 56 | 3.1E-5 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 0.0023 | IPR001810 |
| SMART | SM00612 | kelc_smart | 121 | 169 | 1.5E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 174 | 221 | 5.5E-6 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_019704430.1 | F-box/kelch-repeat protein At1g80440 [Elaeis guineensis] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0MZG4 | F-box/kelch-repeat protein OS=Cocos nucifera OX=13894 GN=COCNU_03G016190 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology