Basic Information
Locus ID:
COCNU_03G013760
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 72388553 | 72401676 | + | COCNU_03G013760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 67,600.65 Da | 48.21 | 87.92 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 348 | 576 | 1.5E-17 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 4 | 35 | 1.2E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 314 | 575 | 6.73E-36 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 8 | 125 | 8.16E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 283 | 392 | 1.9E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 144 | 3.3E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 393 | 589 | 1.5E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 216 | 580 | 16.485205 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 270 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010915498.1 | protein MALE DISCOVERER 2 isoform X1 [Elaeis guineensis] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I3P6 | Protein MALE DISCOVERER 1 OS=Cocos nucifera OX=13894 GN=COCNU_03G013760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology