Basic Information
Locus ID:
COCNU_03G012650
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 69319128 | 69329874 | + | COCNU_03G012650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 63,344.45 Da | 48.55 | 77.99 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 156 | 230 | 8.19022E-15 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 268 | 363 | 2.0E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 153 | 244 | 2.2E-16 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 444 | 559 | 1.18E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 157 | 244 | 4.97E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 143 | 281 | 5.8E-19 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 282 | 386 | 1.1E-13 | - |
| SMART | SM00225 | BTB_4 | 149 | 247 | 4.0E-10 | IPR000210 |
| SMART | SM00875 | BACK_2 | 263 | 365 | 5.9E-9 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 147 | 216 | 13.239526 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 67 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_010915728.1 | BTB/POZ domain-containing protein POB1 isoform X1 [Elaeis guineensis] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0I429 | BTB/POZ domain-containing protein POB1 OS=Cocos nucifera OX=13894 GN=COCNU_03G012650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology