Basic Information
Locus ID:
COCNU_03G012460
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 68834751 | 68859825 | - | COCNU_03G012460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 143,651.30 Da | 45.05 | 93.66 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 513 | 638 | 4.63533E-21 | - |
| Pfam | PF17862 | AAA+ lid domain | 665 | 706 | 2.7E-11 | IPR041569 |
| Pfam | PF03141 | Putative S-adenosyl-L-methionine-dependent methyltransferase | 1109 | 1215 | 2.1E-4 | IPR004159 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 515 | 638 | 2.9E-35 | IPR003959 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 1089 | 1242 | 2.01E-9 | IPR029063 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 475 | 731 | 8.86E-58 | IPR027417 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 1077 | 1252 | 1.8E-5 | - |
| Gene3D | G3DSA:1.10.8.60 | - | 643 | 710 | 6.7E-91 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 474 | 642 | 6.7E-91 | IPR027417 |
| SMART | SM00382 | AAA_5 | 511 | 646 | 1.2E-17 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 618 | 637 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 205 | - | - |
| Coils | Coil | Coil | 860 | 887 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010915762.1 | lon protease homolog, mitochondrial isoform X4 [Elaeis guineensis] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 0 | |
| TrEMBL | A0A8K0MYR6 | Putative lon protease, mitochondrial OS=Cocos nucifera OX=13894 GN=COCNU_03G012460 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology