Basic Information
Locus ID:
COCNU_03G010990
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 65424218 | 65428762 | - | COCNU_03G010990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 109,155.87 Da | 34.36 | 102.58 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 94 | 155 | 2.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 61 | 2.2E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 692 | 911 | 2.2E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 167 | 228 | 1.4E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 221 | 581 | 1.65E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 682 | 967 | 9.71E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 21 | 264 | 2.11E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 621 | 3.1E-84 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 673 | 773 | 2.0E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 774 | 987 | 5.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 283 | 1.3E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 182 | 1.8E-39 | IPR032675 |
| SMART | SM00220 | serkin_6 | 690 | 987 | 3.0E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 3.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 360 | 383 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 190 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 215 | 239 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 574 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 287 | 311 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 210.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 987 | 36.400009 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 95 | 117 | 7.041994 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 719 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 818 | 830 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_008783130.1 | receptor-like protein kinase HSL1 [Phoenix dactylifera] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I371 | Receptor-like protein kinase HSL1 OS=Cocos nucifera OX=13894 GN=COCNU_03G010990 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology