Basic Information
Locus ID:
COCNU_03G008370
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
PAP2 superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 58581100 | 58599539 | + | COCNU_03G008370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 62,281.38 Da | 30.36 | 97.29 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03390 | PAP2_containing_1_like | 2 | 203 | 6.15988E-77 | - |
| CDD | cd03390 | PAP2_containing_1_like | 321 | 510 | 7.39434E-86 | - |
| Pfam | PF01569 | PAP2 superfamily | 42 | 204 | 1.2E-26 | IPR000326 |
| Pfam | PF01569 | PAP2 superfamily | 366 | 511 | 4.6E-31 | IPR000326 |
| SUPERFAMILY | SSF48317 | Acid phosphatase/Vanadium-dependent haloperoxidase | 15 | 209 | 7.72E-32 | IPR036938 |
| SUPERFAMILY | SSF48317 | Acid phosphatase/Vanadium-dependent haloperoxidase | 286 | 515 | 3.01E-40 | IPR036938 |
| Gene3D | G3DSA:1.20.144.10 | Phosphatidic acid phosphatase type 2/haloperoxidase | 286 | 516 | 3.2E-40 | - |
| Gene3D | G3DSA:1.20.144.10 | Phosphatidic acid phosphatase type 2/haloperoxidase | 6 | 211 | 1.0E-33 | - |
| SMART | SM00014 | acid_phosph_2 | 40 | 200 | 4.6E-15 | IPR000326 |
| SMART | SM00014 | acid_phosph_2 | 367 | 507 | 1.3E-25 | IPR000326 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 249 | - | - |
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15080.1 | lipid phosphate phosphatase 2. Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals. | 0 |
| RefSeq | XP_010916472.1 | lipid phosphate phosphatase 2 isoform X4 [Elaeis guineensis] | 0 |
| Q9XI60 | Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=LPP2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0I2V2 | Lipid phosphate phosphatase 2 OS=Cocos nucifera OX=13894 GN=COCNU_03G008370 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology