Basic Information
Locus ID:
COCNU_03G006330
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 52141411 | 52154406 | - | COCNU_03G006330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 72,558.58 Da | 40.28 | 97.77 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 83 | 121 | 1.7E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 149 | 208 | 3.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 335 | 606 | 5.4E-44 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 83 | 232 | 8.5E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 609 | 1.89E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 411 | 628 | 2.3E-70 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 81 | 242 | 1.7E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 410 | 2.6E-40 | - |
| SMART | SM00220 | serkin_6 | 334 | 608 | 6.1E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 334 | 621 | 36.612019 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 457 | 469 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 340 | 362 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_010916943.1 | LRR receptor kinase BAK1 [Elaeis guineensis] | 0 |
| B8BB68 | LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0MYL4 | LRR receptor kinase BAK1 OS=Cocos nucifera OX=13894 GN=COCNU_03G006330 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology