Basic Information
Locus ID:
COCNU_03G005480
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 49587921 | 49590870 | + | COCNU_03G005480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 63,621.48 Da | 39.13 | 87.87 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 53 | 273 | 4.78509E-77 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 53 | 279 | 3.3E-53 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 397 | 558 | 2.4E-25 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 54 | 276 | 1.82E-54 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 376 | 561 | 4.78E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 471 | 1.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 472 | 577 | 4.4E-24 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 46 | 298 | 9.9E-59 | - |
| SMART | SM00220 | serkin_6 | 396 | 592 | 3.1E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 396 | 592 | 24.73946 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 525 | 537 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010917326.2 | L-type lectin-domain containing receptor kinase S.6 [Elaeis guineensis] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I2P1 | Putative L-type lectin-domain containing receptor kinase S.6 OS=Cocos nucifera OX=13894 GN=COCNU_03G005480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology