Basic Information
Locus ID:
COCNU_03G005230
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 48173122 | 48186424 | - | COCNU_03G005230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 191,502.27 Da | 46.23 | 73.56 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 285 | 513 | 7.84944E-101 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1414 | 1677 | 3.43336E-149 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 359 | 506 | 5.8E-20 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1453 | 1618 | 3.3E-33 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1620 | 1675 | 1.9E-7 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1413 | 1677 | 6.54E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 356 | 479 | 1.81E-29 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 347 | 479 | 7.1E-37 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1394 | 1534 | 9.6E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1537 | 1678 | 5.6E-42 | - |
| SMART | SM00330 | PIPK_2 | 1391 | 1678 | 5.7E-127 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1361 | 1677 | 58.747417 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1698 | 1713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1201 | 1220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1692 | 1713 | - | - |
| Coils | Coil | Coil | 992 | 1012 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_019704846.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B isoform X1 [Elaeis guineensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I2S5 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Cocos nucifera OX=13894 GN=COCNU_03G005230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology