Basic Information
Locus ID:
COCNU_03G002670
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 27893269 | 27899112 | - | COCNU_03G002670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 23,228.54 Da | 35.10 | 87.38 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 34 | 74 | 2.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 32 | 75 | 5.76E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 30 | 72 | 5.0E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 32 | 72 | 8.729132 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01620.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_008809419.2 | F-box protein SKIP28 [Phoenix dactylifera] | 0 |
| Q9ZU90 | F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I1V2 | F-box domain-containing protein OS=Cocos nucifera OX=13894 GN=COCNU_03G002670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology