Basic Information
Locus ID:
COCNU_03G001350
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Serine threonine-protein kinase HT1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8722951 | 8733109 | - | COCNU_03G001350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.90 | 45,488.69 Da | 32.72 | 84.79 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 106 | 378 | 9.97856E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 104 | 378 | 3.7E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 378 | 3.55E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 89 | 181 | 2.0E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 206 | 388 | 2.3E-60 | - |
| SMART | SM00220 | serkin_6 | 100 | 381 | 9.7E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 100 | 381 | 41.686127 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 245 | 257 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 239 | 257 | 4.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 305 | 327 | 4.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 349 | 371 | 4.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 201 | 214 | 4.6E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010917790.1 | serine/threonine-protein kinase STY13 [Elaeis guineensis] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MYI7 | Serine/threonine-protein kinase STY13 OS=Cocos nucifera OX=13894 GN=COCNU_03G001350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology