Basic Information
Locus ID:
COCNU_03G001340
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
HMT3
Description:
homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8691932 | 8703536 | - | COCNU_03G001340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 42,004.10 Da | 36.84 | 92.19 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 24 | 325 | 4.4E-60 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 19 | 334 | 2.75E-65 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 12 | 325 | 1.2E-84 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 11 | 326 | 34.021412 | IPR003726 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_010917789.1 | homocysteine S-methyltransferase 2 [Elaeis guineensis] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MY34 | Homocysteine S-methyltransferase 2 OS=Cocos nucifera OX=13894 GN=COCNU_03G001340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology