Basic Information
Locus ID:
COCNU_03G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 36040 | 46708 | + | COCNU_03G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 143,877.70 Da | 45.26 | 85.73 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 314 | 374 | 3.6E-21 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 69 | 309 | 7.5E-71 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 63 | 411 | 2.78E-105 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 57 | 387 | 6.9E-118 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 61 | 383 | 9.0E-132 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 63 | 375 | 94.26313 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 296 | 307 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 135 | 156 | 3.8E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 264 | 281 | 3.8E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 297 | 315 | 3.8E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 325 | 346 | 3.8E-38 | IPR001752 |
| Coils | Coil | Coil | 1080 | 1128 | - | - |
| Coils | Coil | Coil | 382 | 416 | - | - |
| Coils | Coil | Coil | 558 | 578 | - | - |
| Coils | Coil | Coil | 524 | 544 | - | - |
| Coils | Coil | Coil | 1199 | 1219 | - | - |
| Coils | Coil | Coil | 1034 | 1054 | - | - |
| Coils | Coil | Coil | 802 | 822 | - | - |
| Coils | Coil | Coil | 730 | 750 | - | - |
| Coils | Coil | Coil | 623 | 671 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010917897.1 | kinesin-like protein KIN-12G [Elaeis guineensis] | 0 |
| Q75LL2 | Kinesin-like protein KIN-12G OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12G PE=3 SV=1 | 0 | |
| TrEMBL | A0A8K0MXL4 | Kinesin-like protein KIN-12G OS=Cocos nucifera OX=13894 GN=COCNU_03G000010 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology