Basic Information
Locus ID:
COCNU_02G017950
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
5-kinase 6
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 77922768 | 77924105 | - | COCNU_02G017950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 48,671.88 Da | 41.17 | 48.07 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02493 | MORN repeat | 83 | 105 | 4.3E-7 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 221 | 242 | 3.4E-6 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 175 | 196 | 2.0E-4 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 198 | 220 | 3.9E-7 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 129 | 151 | 1.9E-6 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 106 | 127 | 4.6E-6 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 152 | 173 | 2.2E-4 | IPR003409 |
| SUPERFAMILY | SSF82185 | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 78 | 195 | 1.27E-31 | - |
| SUPERFAMILY | SSF82185 | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 170 | 261 | 9.02E-22 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 203 | 267 | 2.4E-10 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 74 | 112 | 3.2E-7 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 113 | 157 | 3.7E-10 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 158 | 202 | 4.0E-9 | - |
| SMART | SM00698 | morn | 81 | 102 | 1.8E-5 | IPR003409 |
| SMART | SM00698 | morn | 127 | 148 | 0.0018 | IPR003409 |
| SMART | SM00698 | morn | 104 | 125 | 6.2E-4 | IPR003409 |
| SMART | SM00698 | morn | 173 | 194 | 0.0056 | IPR003409 |
| SMART | SM00698 | morn | 196 | 217 | 8.1E-4 | IPR003409 |
| SMART | SM00698 | morn | 150 | 171 | 0.0015 | IPR003409 |
| SMART | SM00698 | morn | 219 | 240 | 3.6E-4 | IPR003409 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 339 | - | - |
KEGG Pathway
Pathway:
ko00562 (Inositol phosphate metabolism)
map00562 (Inositol phosphate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04070 (Phosphatidylinositol signaling system)
map04070 (Phosphatidylinositol signaling system)
ko04072 (Phospholipase D signaling pathway)
map04072 (Phospholipase D signaling pathway)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
map04666 (Fc gamma R-mediated phagocytosis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56960.1 | phosphatidyl inositol monophosphate 5 kinase 4. Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology. | 0 |
| RefSeq | XP_017700645.2 | phosphatidylinositol 4-phosphate 5-kinase 6 isoform X2 [Phoenix dactylifera] | 0 |
| Q9M1K2 | Phosphatidylinositol 4-phosphate 5-kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PIP5K4 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8K0I1B3 | Putative Phosphatidylinositol 4-phosphate 5-kinase 4 OS=Cocos nucifera OX=13894 GN=COCNU_02G017950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 2 | COCNU_02G017950, COCNU_02G017960 |
| Arecaceae | Phoenix dactylifera | 7 | gene-LOC103700215, gene-LOC103700566, gene-LOC120110110 ... |