Basic Information
Locus ID:
COCNU_02G015710
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Alpha mannosidase, middle domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 66170992 | 66176366 | - | COCNU_02G015710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 57,654.93 Da | 39.41 | 88.85 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 98 | 314 | 2.0E-48 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 396 | 502 | 2.4E-11 | IPR041147 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 6 | 505 | 1.32E-127 | IPR011013 |
| Gene3D | G3DSA:2.70.98.30 | - | 95 | 362 | 4.5E-93 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 382 | 508 | 4.1E-36 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 1 | 94 | 1.3E-16 | IPR013780 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_010942369.1 | alpha-mannosidase At3g26720 isoform X1 [Elaeis guineensis] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0I193 | Putative alpha-mannosidase OS=Cocos nucifera OX=13894 GN=COCNU_02G015710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology