Basic Information
Locus ID:
COCNU_02G013750
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
NAC domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 54327050 | 54334207 | + | COCNU_02G013750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 48,032.73 Da | 42.82 | 76.28 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 68 | 209 | 4.1E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 52 | 228 | 3.53E-34 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 76 | 232 | 8.9E-26 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 67 | 228 | 28.580753 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 275 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_010912974.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Elaeis guineensis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I0R4 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Cocos nucifera OX=13894 GN=COCNU_02G013750 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology