Basic Information
Locus ID:
COCNU_02G013440
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 53341331 | 53343238 | - | COCNU_02G013440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 40,439.73 Da | 63.06 | 80.71 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02135 | TAZ zinc finger | 214 | 301 | 1.6E-12 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 24 | 124 | 3.2E-13 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 24 | 124 | 1.73E-13 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 206 | 309 | 3.4E-20 | IPR035898 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 204 | 328 | 4.2E-21 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 16 | 128 | 3.1E-20 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 131 | 203 | 1.0E-9 | - |
| SMART | SM00225 | BTB_4 | 24 | 131 | 1.7E-12 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 207 | 302 | 1.0E-18 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 24 | 93 | 12.681111 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63160.1 | BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. | 0 |
| RefSeq | XP_010912923.1 | BTB/POZ and TAZ domain-containing protein 2 isoform X1 [Elaeis guineensis] | 0 |
| Q9FMK7 | BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I009 | BTB/POZ and TAZ domain-containing protein 2 OS=Cocos nucifera OX=13894 GN=COCNU_02G013440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology