Basic Information
Locus ID:
COCNU_02G008540
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Small ubiquitin-related modifier 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 27616462 | 27616720 | + | COCNU_02G008540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.09 | 5,865.35 Da | 46.66 | 63.85 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 1 | 45 | 2.6E-13 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 50 | 1.07E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 51 | 4.3E-24 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 50 | 12.11722 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_020260975.1 | small ubiquitin-related modifier 2 [Asparagus officinalis] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0HYZ2 | Putative Small ubiquitin-related modifier 2 OS=Cocos nucifera OX=13894 GN=COCNU_02G008540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology