Basic Information
Locus ID:
COCNU_02G008130
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Type I inositol-1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 25363170 | 25374991 | + | COCNU_02G008130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 122,927.47 Da | 52.32 | 75.68 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 642 | 891 | 5.9E-6 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 232 | 614 | 1.76E-19 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 615 | 923 | 5.04E-37 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 678 | 932 | 3.0E-58 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 211 | 371 | 9.3E-7 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 453 | 623 | 2.2E-9 | IPR015943 |
| SMART | SM00320 | WD40_4 | 493 | 531 | 72.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 575 | 906 | 4.7E-52 | IPR000300 |
| SMART | SM00320 | WD40_4 | 572 | 609 | 39.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 253 | 294 | 4.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 312 | 351 | 8.6 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05630.2 | Endonuclease/exonuclease/phosphatase family protein. Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightstimulated increase in cytosolic calcium ion. | 0 |
| RefSeq | XP_010926647.1 | LOW QUALITY PROTEIN: type II inositol polyphosphate 5-phosphatase 15-like [Elaeis guineensis] | 0 |
| Q9SYK4 | Type I inositol polyphosphate 5-phosphatase 13 OS=Arabidopsis thaliana OX=3702 GN=IP5P13 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MWI6 | Type II inositol polyphosphate 5-phosphatase 15 OS=Cocos nucifera OX=13894 GN=COCNU_02G008130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology