Basic Information
Locus ID:
COCNU_02G005250
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15288242 | 15290355 | + | COCNU_02G005250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 45,720.50 Da | 35.34 | 94.28 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 328 | 397 | 1.1E-15 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 2 | 311 | 6.5E-78 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 2 | 311 | 4.32E-84 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 321 | 403 | 1.1E-6 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 1 | 316 | 4.7E-113 | - |
| SMART | SM00768 | X8_cls | 327 | 411 | 1.7E-26 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.3 | - | 0 |
| RefSeq | XP_010926119.1 | glucan endo-1,3-beta-glucosidase 3 [Elaeis guineensis] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0HZ02 | Glucan endo-1,3-beta-glucosidase 3 OS=Cocos nucifera OX=13894 GN=COCNU_02G005250 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology