Basic Information
Locus ID:
COCNU_02G005220
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Homocysteine S-methyltransferase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15073268 | 15077462 | + | COCNU_02G005220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 35,831.48 Da | 40.31 | 99.97 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 20 | 320 | 1.4E-73 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 15 | 323 | 1.44E-81 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 7 | 320 | 2.5E-98 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 282 | 325 | 1.4 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 4 | 245 | 4.7E-6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 7 | 321 | 48.267399 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_010926123.1 | homocysteine S-methyltransferase 1 isoform X1 [Elaeis guineensis] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0HZ26 | Homocysteine S-methyltransferase 1 OS=Cocos nucifera OX=13894 GN=COCNU_02G005220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology