Basic Information
Locus ID:
COCNU_02G004750
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 13476738 | 13512944 | + | COCNU_02G004750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.21 | 9,187.45 Da | 39.77 | 78.03 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05184 | Saposin-like type B, region 1 | 22 | 58 | 7.6E-8 | IPR007856 |
| SUPERFAMILY | SSF47862 | Saposin | 9 | 58 | 2.62E-9 | IPR011001 |
| Gene3D | G3DSA:1.10.225.10 | - | 18 | 58 | 4.9E-15 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 59 | 72 | 4.9E-15 | IPR021109 |
| ProSiteProfiles | PS50015 | Saposin B type domain profile. | 19 | 60 | 10.7188 | IPR008139 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11910.1 | aspartic proteinase A1. Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8). | 0 |
| RefSeq | XP_029121375.1 | aspartic proteinase oryzasin-1 [Elaeis guineensis] | 0 |
| O04057 | Aspartic proteinase OS=Cucurbita pepo OX=3663 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0HYZ3 | Putative Aspartic proteinase A1 OS=Cocos nucifera OX=13894 GN=COCNU_02G004750 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg38318 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25822 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000010767 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G004750 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3149.V1.1 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5128 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049989 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G098300 |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G269300.1 |
| Poaceae | Zea mays | 19 | Zm00001eb046200_P001, Zm00001eb056740_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-56591 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g09600 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-22268 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9719 |
| Zosteraceae | Zostera marina | 1 | Zosma04g06120.v3.1 |