Basic Information
Locus ID:
COCNU_02G002670
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Amino acid permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 7710644 | 7712428 | - | COCNU_02G002670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 64,370.91 Da | 33.14 | 102.68 | 0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 517 | 566 | 8.4E-17 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 78 | 479 | 1.8E-49 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 74 | 503 | 2.4E-90 | - |
| PIRSF | PIRSF006060 | AA_transporter | 56 | 583 | 1.6E-68 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17120.1 | cationic amino acid transporter 8. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. | 0 |
| RefSeq | XP_010911512.1 | LOW QUALITY PROTEIN: cationic amino acid transporter 5-like [Elaeis guineensis] | 0 |
| Q9SHH0 | Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana OX=3702 GN=CAT8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0HYN9 | Cationic amino acid transporter 5-like OS=Cocos nucifera OX=13894 GN=COCNU_02G002670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology