Basic Information
Locus ID:
COCNU_02G001880
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5708119 | 5716236 | + | COCNU_02G001880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 70,351.93 Da | 41.61 | 95.77 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 81 | 9.6E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 144 | 163 | 0.041 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 315 | 584 | 2.3E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 296 | 586 | 3.33E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 213 | 5.1E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 234 | 3.9E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 390 | 600 | 4.0E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 389 | 2.6E-36 | - |
| SMART | SM00220 | serkin_6 | 314 | 584 | 8.2E-34 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 144 | 166 | 7.519437 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 314 | 590 | 37.007771 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 320 | 342 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 436 | 448 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 592 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 613 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010925612.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X2 [Elaeis guineensis] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0HY14 | Protein NSP-INTERACTING KINASE 2 OS=Cocos nucifera OX=13894 GN=COCNU_02G001880 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology