Basic Information
Locus ID:
COCNU_02G001660
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5201945 | 5205264 | - | COCNU_02G001660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 113,856.96 Da | 38.96 | 100.17 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 718 | 988 | 9.8845E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 535 | 573 | 8.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 82 | 1.4E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 706 | 917 | 2.3E-43 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 302 | 606 | 6.43E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 986 | 2.7E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 79 | 371 | 6.12E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 218 | 375 | 4.3E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 376 | 638 | 6.5E-60 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 689 | 784 | 3.4E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 785 | 1002 | 4.1E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 152 | 8.2E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 217 | 4.2E-16 | IPR032675 |
| SMART | SM00220 | serkin_6 | 704 | 993 | 1.7E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 512 | 536 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 349 | 373 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 254 | 278 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 205 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 560 | 584 | 8.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 1003 | 36.583752 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 735 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_010925541.1 | receptor-like protein kinase HSL1 [Elaeis guineensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MWB1 | Receptor-like protein kinase HSL1 OS=Cocos nucifera OX=13894 GN=COCNU_02G001660 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology